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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4y61B_ | PDB header: hydrolase/signaling protein | Chain: B: PDB Molecule: slit and ntrk-like protein 2; | PDBTitle: crystal structure of the complex between slitrk2 lrr1 and ptp delta2 ig1-fn1 |
Added to library: Sat Jun 6 08:40:58 2015 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | C | K | I | R | C | L | C | E | E | K | E | N | V | L | N | I | N | C | E | N | K | G | F | T | T | V | S | L | L | Q | P | P | Q | Y | R | I | Y | Q | L | F | L | N | G | N | L | L | T | R | L | Y | P | N | E | F | V | N | Y | S | N | A | V | T | L | H | L | G | N | N | G | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | T | T | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | Q | E | I | R | P | G | A | F | S | G | L | K | T | L | K | R | L | H | L | N | N | N | K | L | E | V | L | R | E | D | T | F | L | G | L | E | S | L | E | Y | L | Q | A | D | Y | N | Y | I | S | T | I | E | A | G | A | F | S | K | L | N | K | L | K | V | L | I | L | N | D | N |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | T | T | S | S | S | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | G | G | G | G | T | T | T | T | ![]() | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | L | L | L | S | L | P | S | N | V | F | R | F | V | L | L | T | H | L | D | L | R | G | N | R | L | K | V | M | P | F | A | G | V | L | E | H | I | G | G | I | M | E | I | Q | L | E | E | N | P | W | N | C | T | C | D | L | L | P | L | K | A | W | L | D | T | I | T | V | F | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | T | S | S | S | S | S | ![]() | ![]() | ![]() | T | T | S | S | T | T | T | ![]() | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
Sequence | G | E | I | V | C | E | T | P | F | R | L | H | G | K | D | V | T | Q | L | T | R | Q | D | L | C | |||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | ![]() | ![]() | ![]() | G | G | G | T | T | B | T | T | T | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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