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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4y01B_

Fold library idPDB HeaderMoleculeTitle
c4y01B_PDB header: hydrolaseChain: B: PDB Molecule: peptidase s46;PDBTitle: crystal structure of dipeptidyl peptidase 11 (dpp11) from2 porphyromonas gingivalis


Added to library: Sat Jul 18 08:19:25 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DEGXWLXQQLGRKYAQXKERGLKXKEYDLYNPNGTSLKDAVVLFDGGCTGEVVSDRGLVLTNHHCGYDXI
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Known secondary structure (DSSP)



B
GGGTT

S


TTS

GGGGTTT
BTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence QAHSTLEHNYLENGFWAXREADELPNKDISVVFIDKIEDVTDYVKKELKAIKDPNSXDYLSPKYLQKLAD
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Known secondary structure (DSSP) T

STT


SSGGG
B

SS


S
S
TT

GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KKAGKNFSAKNPGLSVEIKAFYGGNLYLXFTKKTYTDVRLVGAPPSSIGKFGADTDNWIWPRHTGDFSIF
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Known secondary structure (DSSP)
SSSTTGGGT


TTTTTTTTT
SS





 .........220.........230.........240.........250.........260.........270.........280
Sequence RIYADKNGNPAPYSEDNVPLKPKRFFNISLGGVQENDYAXIXGFPGTTHRYFTASEVDEWKSIDNDIRIR
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Known secondary structure (DSSP)
TTS



S
TT



S




S


TT






TT

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence XRDIRQGVXLREXLADPQIKIXYSAKYAASQNAYKRAIGANWAIKTRGLRQNKQAXQDRLIAWGAKQGTP
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Known secondary structure (DSSP)
S
TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence RYEEAVHEIDATVAKRADLRRRYWXIEEGIIRGIEFARSPIPTEDETKALQGNDASARKEAIDKIRTRYS
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Known secondary structure (DSSP) TTTTT
GGGG




SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence KFANKDYSAEVDKKVAVAXLTEYLKEIPYENLPLHLRLVKDRFAGDVQAYVDDIFARSVFGSEAQFDAFA
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Known secondary structure (DSSP) T
TT

S
GGGS
GGGTT

TTSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence AVPSVEKLAEDPXVLFASSVFDEYRKLYNELRPYDDPILRAQRTYIAGLLEXDGDQDQFPDANLTLRFTY
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Known secondary structure (DSSP) S

T
GGG
STT





SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence GQVKGYSPRDNVYYGHQTTLDGVXEKEDPDNWEFVVDPKLKAVYERKDFGRYADRSGRXPVAFCATTHTT
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Known secondary structure (DSSP) B

TT
S

TTSGGG


T

GGGS
TTS

S



 .........640.........650.........660.........670.........680.........690.........
Sequence GGNSGSPVXNANGELIGLNFDRNWEGVGGDIQYLADYQRSIIVDIRYVLLVIDKVGGCQRLLDEXNIVP
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Known secondary structure (DSSP) TT
TT

TTS

GGGGGGGTS

TTT

TT

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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