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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xzcB_

Fold library idPDB HeaderMoleculeTitle
c4xzcB_PDB header: rna binding proteinChain: B: PDB Molecule: nucleoprotein;PDBTitle: the crystal structure of kupe virus nucleoprotein


Added to library: Sat Sep 5 08:20:25 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MENQIKANTKKEYDEWFKPYAEKTHLKSVLTNSASFCDALPDLSIFEVKMGLATDDREKDSIYACAMVEA
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Known secondary structure (DSSP)






SSTTT
B
SSBSS
BS
SS





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TKFCAPIYECGWACCTGMVENGLKWFDKNKDVIKLWDGKYSDLMKNVPEPEQLVAYQRAAQKWRQDNKFE
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Known secondary structure (DSSP) TTTS
TTSTTGGGTTTTS


TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence INQYTRSLTHSVQADYKVPGEYAVEVKEMLSDMVRRRNISREHVNWGRELAAGKFQVVFNPPWGDINKTG
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Known secondary structure (DSSP)
SGGG
B





S




T

TT
GGGGTS
TTS
TT
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence RSGIPLAVTSMVKVAELDGHKRLEDIRKTLLDLKKWIEDNKDELEDGKGDELVKTLTKQLADAIELAKKS
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Known secondary structure (DSSP) TTS
B
TTTGGGS
TTTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SALRAQGAQIDSIFSSYYWAWKAGITPVTFPTLSQFLFEMGQGPRGGKKMIKALTNTPLKWGKKIISLFA
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Known secondary structure (DSSP) S


T

TTTTTTT
TT
SSTB
 .........360.........370.........380.........390.........400.........410.........420
Sequence EDDFNGNKLYMHPGVLTAGRMSEMGACFGVVPVSNPEDAVLGSGHSKSLLNYKIDTNAGNPCAKEIVQLF
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Known secondary structure (DSSP)
SS
SS
STTS
TT
B
TTTSSS
TTSGGGGGG



GGGGGGB


GGGT
 .........430.........440.........450.........460.....
Sequence RIQKAGFDLDMDIVASEHLLHQSLVGKRCHFQNAYKVKGNATNVE
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Known secondary structure (DSSP)







T
SSTTSB
TT



S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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