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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xz6A_

Fold library idPDB HeaderMoleculeTitle
c4xz6A_PDB header: transport proteinChain: A: PDB Molecule: glycine betaine/proline abc transporter, periplasmicPDBTitle: tmox in complex with tmao


Added to library: Sat Aug 22 08:20:57 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DSSDPIVIPIHNWSSQIVMSNVVGQIFEEMGVAVEFVTTDSQAVYESVRLGDVTLELEVWEGAFGASFRA
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Known secondary structure (DSSP)

SS

SSTT



TTTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALEKGGIVDVGDHDAVTREDWWYPMWTKDACPGLPDWKALNDCAAVFATAETGDKGRYLDGPVDWLKHGK
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Known secondary structure (DSSP) SS
S

BTT
TTTTBTGGGG

TTTTTS

TTSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence ERVEALGMNFEVINAGSAAALWAEIGAAEADKRPVVVFNWTPNFAEAVWPGEFVEFPEWVDGCDKDPAVG
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Known secondary structure (DSSP) T
S
SSTTTT


SSSS

B
S


TTTTT
TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PNPDALYDCGNPATGYLKKAAWEGMEAKWPDAYAVLTRISFTNPQIAEMAKLVDVDEMEPDEAAEAWLEA
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Known secondary structure (DSSP) S
TTSS

S


TTB
TT




TS


 .........290.
Sequence NEDVWRPWLDG
Predicted secondary structure

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Known secondary structure (DSSP) TGGGGT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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