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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4xsqA_ | 1.79 | PDB header: immune system | Chain: A: PDB Molecule: variable lymphocyte receptor-like protein bf66946; |
Added to library: Sat Mar 26 08:31:05 2016 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | C | P | S | A | C | K | C | T | V | S | L | Y | G | E | X | V | V | A | C | G | G | X | G | L | T | E | I | P | E | D | I | P | H | R | A | V | Y | L | V | L | K | D | N | N | I | T | K | I | T | S | Y | S | F | K | G | L | R | N | L | Q | G | I | D | L | S | N | N | K | I | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | T | T | T | T | T | T | S | ![]() | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | H | I | S | S | A | A | L | R | H | L | G | H | L | D | D | I | D | L | S | R | N | E | L | T | S | V | S | E | K | L | F | D | F | P | I | S | S | A | K | A | Q | G | R | R | F | F | V | Y | L | A | N | N | P | W | G | C | D | C | R | X | A | W | L | A | Q | E | L | A | G | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | S | G | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | S | ![]() | ![]() | S | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
Sequence | S | K | T | F | G | D | R | H | X | E | C | A | T | P | A | A | L | A | G | R | G | L | S | E | I | P | Q | T | S | F | V | C | T | G | ||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | B | T | T | B | ![]() | ![]() | ![]() | S | G | G | G | T | T | B | G | G | G | S | G | G | G |
Download: | PDB structure | FASTA sequence |
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