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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xruE_

Fold library idPDB HeaderMoleculeTitle
c4xruE_PDB header: protein bindingChain: E: PDB Molecule: rnl;PDBTitle: structure of pnkp1/rnl/hen1 complex


Added to library: Sat Apr 25 08:15:15 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EDKTLIKKRIDWFCKNKINAFSPTISPAPKSVERNEIESLYEGILWFVLNGVKEIVIEKKYMGSYCDIYL
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Known secondary structure (DSSP)

TT











TTTT
SS
TTT
S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence HRRLEDTYLVSRNGYKINHLDQEQCLRALQGLHDRFSWDGVELRIIQSELMPWSILGKGLINNEFSAYYI
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Known secondary structure (DSSP) SSGGG

SSS
B

SS
TTS

SS
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SHEIHAEYLVQSSLYEKLQKIQQEPAYLSFVADAKVLSAKELKDKYPMHIIRQYQSIRDFKFLDLPHYQQ
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Known secondary structure (DSSP) SSTTSSTTTSS
S
TT

SSTTTTSS



 .........220.........230.........240.........250.........260.........270.........280
Sequence NIQLFKRQLDIFGKEAAPFFKPFNILKEVYTDGREHFVNDNLSFQQINDDDFLHYQFTDREDFEAKYPQI
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Known secondary structure (DSSP) TS



SSS



GGGGGTSS

S




SSSTTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RAWVDQVNQSDEEGVVIKPRTAFLPGMPPAFKVRNNDYLTLVYGVDFEDRLQEQIAKRNIKGKLRCSIND
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Known secondary structure (DSSP) TT

SSS

TT

S

S
TTTTTT


TT
 .........360.........370.........380.........390...
Sequence WAINAKLLAIPYSELGEENYELKNLVLDRILGEEIENQLDSRL
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Known secondary structure (DSSP) TS
GGG
SSS
TTS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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