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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xrpA_

Fold library idPDB HeaderMoleculeTitle
c4xrpA_PDB header: protein bindingChain: A: PDB Molecule: pnkp1;PDBTitle: structure of the pnkp1/rnl/hen1 rna repair complex


Added to library: Sat Apr 25 08:21:28 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SAKNNTHHFPKLLILVGAPGSGKSTFARYFIRTEDNWVRVNRDDFRLMQFGDSLMSPFYEERITKMVEAS
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Known secondary structure (DSSP)

TT






TTSSSSS
TT

S


 .........80.........90.........100.........110.........120.........130.........140
Sequence VIALLKNRTNVIIDATNSSLRSLQDMVHTYTEYADISFKVFDLPVEELVKRCDKRCEQTGKFIPKSAIEK
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Known secondary structure (DSSP) TT

S
SSTT



TTTTTTTTSSS



TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence HVTQLQYTKEKFDFKPIPRALKETSLTYADQDTSLPKAVICDLDGTLSLLNGRDPYNASTADQDLLNTPV
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Known secondary structure (DSSP) TTTS



B














TTS

TBTTT
TTS
SS
GGGGGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence AMVLKMAKQQGYKVILLSGRENAYREPTERFLAKYQIDYDLLLMRDTNDYRKDNIIKKELFLEEIQGKYF
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Known secondary structure (DSSP) TTTT
GGGTT


S
TT

S
TTTT
 .........290.........300.........310.
Sequence VEFLLDDRNQVVDMWRRELALPCFQVNYGDF
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Known secondary structure (DSSP)

TT



S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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