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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c4xlwB_ | PDB header: protein binding | Chain: B: PDB Molecule: delta-like protein; | PDBTitle: complex of notch1 (egf11-13) bound to delta-like 4 (n-egf2) |
| Added to library: Sat Mar 7 08:36:41 2015 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | S | S | S | I | F | Q | L | R | L | Q | E | F | A | N | E | R | G | M | L | A | N | G | R | P | C | E | P | G | C | R | T | F | F | R | I | C | L | K | H | Y | Q | A | T | F | S | E | G | P | C | T | F | G | N | V | S | T | P | V | L | G | T | N | S | F | V | I | R | D | K | N |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | B | T | T | S | B | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
| Sequence | S | G | R | N | P | L | Q | L | P | L | N | F | T | W | P | G | T | F | S | L | N | I | Q | A | W | H | T | P | G | D | D | L | R | P | E | T | S | P | G | N | S | L | I | S | Q | I | I | I | Q | G | S | L | A | V | G | N | W | K | S | D | E | Q | N | N | T | L | T | R | L | R |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | T | T | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
| Sequence | Y | S | Y | R | V | V | C | S | D | N | Y | Y | G | D | S | C | S | R | L | C | R | D | D | H | F | G | H | Y | E | C | Q | P | D | G | S | P | S | C | L | P | G | W | T | G | Y | C | D | Q | P | I | C | L | S | G | C | H | E | Q | N | G | Y | C | S | P | D | E | C | N | C | R |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | S | S | S | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
| Sequence | P | G | W | Q | G | P | L | C | N | E | C | I | P | H | K | G | C | R | H | G | T | C | T | I | P | W | Q | C | A | C | D | E | G | W | G | G | L | F | C | D | Q | A | ||||||||||||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | ![]() | ![]() | S | S | S | S | ![]() | ![]() | T | T | S | S | ![]() | ![]() | S | S | S | S | ![]() | ![]() | T | T | B | T | T | T | T | B |
| Download: | PDB structure | FASTA sequence |
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