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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xkyC_

Fold library idPDB HeaderMoleculeTitle
c4xkyC_PDB header: lyaseChain: C: PDB Molecule: dihydrodipicolinate synthase;PDBTitle: structure of dihydrodipicolinate synthase from the commensal bacterium2 bacteroides thetaiotaomicron at 2.1 a resolution


Added to library: Sat Apr 4 08:18:30 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNIPLSGIIPPLVTPLLDDDVLDVEGLQRLIEHLIAGGVHALFVLGTTGESQSLSYKLRMEMIKNTCRIA
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Known secondary structure (DSSP)

SS



B



TT
TT
S
SSTTTTGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KGRLPVLVCISDTSIVESVNLACLAADHGADAVVSAPPYYFATGQPELIEFYEHLLPQLPLPLFLYNMPT
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Known secondary structure (DSSP) TTSS



S
TT




TT



GGG
SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence HTKVNFAPATIQRIAENPGVIGFKDSSANTVYFQSVMYAMKDNPDFSMLVGPEEIMAESVLLGAHGGVNG
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Known secondary structure (DSSP) S



TTSTT



TT
TTS

GGGTT



G
 .........220.........230.........240.........250.........260.........270.........280
Sequence GANMFPELYVSLYNAAKNADMEEVRRLQEKVMQISATIYTVGQHGSSYLKGLKCALSLLGICSDYVAAPF
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Known secondary structure (DSSP) GGGT
TT
SS

SSS
TTSS

B

TTS
 .........290.........
Sequence HKFEQRERGKIWKALQNLG
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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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