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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xi7A_

Fold library idPDB HeaderMoleculeTitle
c4xi7A_PDB header: ligaseChain: A: PDB Molecule: e3 ubiquitin-protein ligase mib1;PDBTitle: crystal structure of the mzm-rep domains of mind bomb 1 in complex2 with jagged1 n-box peptide


Added to library: Sat Mar 21 08:23:34 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SRVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANYRCSGAYDLRILDSAPT
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Known secondary structure (DSSP)






TT

TT

STTTTSSTTB
TTTTS
BSSSB

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence GIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFYRITTPGSERVLLESRRKSKKI
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Known secondary structure (DSSP) T
TT


TTT

SSSSSSSSS

TT
S
TTS

STT





GGGS

 .........150.........160.........170.........180.........190.........200.........210
Sequence TARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLK
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Known secondary structure (DSSP) SSTT

TT

STTTTSSTT


SBTTBTT
TTS
BSGGG
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence CVQDAKGGSFYRDHCPVLGVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPSGN
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Known secondary structure (DSSP)

GGGS
B


B

S
TTTT


GGGGGGGTS


TTS

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RWTFNPAVLTKASQFQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSDLKVEVCGT
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Known secondary structure (DSSP)
GGG
B





TT



TT


GGGGGGTT

TTS
TT
 .........360..
Sequence SWTYNPAAVSKV
Predicted secondary structure

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Known secondary structure (DSSP)
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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