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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xhzA_

Fold library idPDB HeaderMoleculeTitle
c4xhzA_2.80PDB header: cell adhesionChain: A: PDB Molecule: protocadherin-15;


Added to library: Thu Feb 9 17:00:12 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPVFTNSTYTVLVEENLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAF
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Known secondary structure (DSSP)

SSSTT

TT



TTT
S



GGGTTT
TTT
SS


GGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADP
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Known secondary structure (DSSP)
TT


TT

SS






S
S
TT

TT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PGLPASRVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSATVKIL
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Known secondary structure (DSSP) TTSGGG


SS

TTT
SS




TT


SSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence VLHPGEIPRFTQEEYRPPPVSELATKGTMVGVISAAAINQSIVYSIVSGNEEDTFGINNITGVIYVNGPL
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Known secondary structure (DSSP)

GGGS
S
S



TT

TT



TT

S
TT


TTT

S

 .........290.........300.........310.........320.........330...
Sequence DYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENNHPPVFLEHH
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Known secondary structure (DSSP)
TTT

TTT




STT
SS



S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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