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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xhjA_

Fold library idPDB HeaderMoleculeTitle
c4xhjA_PDB header: viral protein/immune systemChain: A: PDB Molecule: envelope glycoprotein h;PDBTitle: ghgl of varicella-zoster virus in complex with human neutralizing2 antibodies.


Added to library: Sat May 16 08:17:57 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALLREYSDRNMSLKLEAFYPTGFDEELIKSLHWGNDRKHVFLVIVKVNPTTHEGDVGLVIFPKYLLSPYR
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Known secondary structure (DSSP)
SSSS


SS


SGGGGS
GGGSSS

TTT



SGGGS


 .........80.........90.........100.........110.........120.........130.........140
Sequence FGFLSHPVTPDVSFFDSSFAPYLTTQHLVAFTTFPPNPLVWHLERAETAATAERPFGVSLLPARPTVPKN
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Known secondary structure (DSSP)

SSSS


SSSTTS



BTTTB
SS
S
GGG
B



TTS

SSSSS



SS





SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TILEHKAHFATWDALARHTFFSAEAIITNSTLRIHVPLFGSVWPIRYWATGSVLLTSDSGRVEVNIGVGF
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Known secondary structure (DSSP)


BSS



SSS

TSS


GGG
B


SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence MSSLISLSSGLPIELIVVPHTVKLNAVTSDTTWFQLNPPGPDPGPSYRVYLLGRGLDMNFSKHATVDICA
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Known secondary structure (DSSP) SSS

TT



B

S
TT





SB



SSSS
TTTTSSS

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence YPEESLDYRYHLSMAHTEALRMTTKADQHDINEESYYHIAARIATSIFALSEMGRTTEYFLLDEIVDVQY
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Known secondary structure (DSSP)
S
TSTTT
S

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence QLKFLNYILMRIGAGAHPNTISGTSDLIFADPSQLHDELSLLFGQFISYDEARDQLKTAYALSRGQDHVN
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Known secondary structure (DSSP) TTT


GGG
TT

T



S
SS


 .........430.........440.........450.........460.........470.........480.........490
Sequence ALSLARRVIMSIYKGLLVKQNLNATERQALFFASMILLNFSSRVLDGRTTLLLMTSMCTAAHATQAALNI
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Known secondary structure (DSSP)
S


S





 .........500.........510.........520.........530.........540.........550.........560
Sequence QEGLAYLNPSKHMFTIPNVYSPCMGSLRTDLTEEIHVMNLLSAIPTRPGLNEVLHTQLDESEIFDAAFKT
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Known secondary structure (DSSP) S

TTT



GGGS

GGGSS
B
GGGSGGGSTTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence MMIFTTWTAKDLHILHTHVPEVFTCQDAAARNGEYVLILPAVQGHSYVITRNKPQRGLVYSLADVDVYNP
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Known secondary structure (DSSP) TTTT

GGGGSSS

T

STTSS


S
SSS
TTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence ISVVYLSKDTCVSEHGVIETVALPHPDNLKECLYCGSVFLRYLTTGAIMDIIIIDSKDTERQLAAMGNST
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Known secondary structure (DSSP)
SS








TTT
SS
SSTT
TTS


B

SS
SS

S
 .........710.........720.........
Sequence IPPFNPDMHGDDSKAVLLFPNGTVVTLLG
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Known secondary structure (DSSP) SGGG
TTTS
TT
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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