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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xguB_

Fold library idPDB HeaderMoleculeTitle
c4xguB_PDB header: atp-binding proteinChain: B: PDB Molecule: putative pachytene checkpoint protein 2;PDBTitle: structure of c. elegans pch-2


Added to library: Sat May 9 08:36:23 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LKNIHAEIRICQKFPKSTVQKRFSEFEELIKAASKNARNWKPISSVELFQGDSSLNELFEKLVIGTCELR
Predicted secondary structure





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Known secondary structure (DSSP)





SSS
GGGTTTTTT
BTT

B



TTSS
GGGGGT
S
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DGELFELTINPSNIHVYKLHKDGPLSQSQLWQLPCVEFDSIWENLIYDSNLKNEVMSYVAALARLSEKHV
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Known secondary structure (DSSP) TT
B





TTS

B





SBTTTTT


SSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NTKIINVNRLILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD
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Known secondary structure (DSSP)
TTTS



S
GGG
TTTT
S
TTS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence QIDELAEDEKCMVFVLIDEVESLGIRAVNALLTQIDRIRRRDNVLILCTSNLESTLDKALVDRADIVKNV
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Known secondary structure (DSSP) SSS
S

TSTTSS
S



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence GQPSDFARYSMLKSSIMELARIGVVIDNEVHTDYWPQDICDTKAPRNEFTEILFKIAQEARGLSGRAISM
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Known secondary structure (DSSP)



TTSB

SSS
TTTS



GGG
S


TSS

 .........360.........370.........380..
Sequence LPTLVYSKSPEETITLPNCMNLFLEAVKERLS
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Known secondary structure (DSSP)
SSSSB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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