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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xg1C_

Fold library idPDB HeaderMoleculeTitle
c4xg1C_2.50PDB header: lyaseChain: C: PDB Molecule: diaminopimelate decarboxylase;


Added to library: Sat Mar 12 08:43:06 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DHFNYQNDGRLFVEGLPVEQVVKKTGTPAYIYSRATIERHWQAFDSAAGKHPHLICYAVKANSNLAVLNL
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Known secondary structure (DSSP)


TTSBTT
SSTTS
GGG


 .........80.........90.........100.........110.........120.........130.........140
Sequence MARMGSGFDIVSVGELMRVIQAGGDPKKIVFSGVGKTEIEISAALQANIMCFNVESISELYRINSVAKAL
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Known secondary structure (DSSP) TT
SSTT

GGG

TT

TT
S

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NVKAPISIRINPNIDAGLKENKFGIEIEQALDVYKIASDLEFLEIKGVDCHIGSQLTEIAPFIEALDKLL
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Known secondary structure (DSSP) T











SSSGGG
SS



SSB

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ILIDLLAEKGITISHLDLGGGLGVPYDDETPPEPAEYMTAIINRMAGRSLKLIFEPGRAIMANAGVLVTK
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Known secondary structure (DSSP) TT







B


SSS




TT
S




SGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence VEFLKLNDKNFAIVDAAMNDLIRPALYSAWQNIIPLNTDYQDGQDRPVRSYDIVGPICETGDFLGKERQL
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Known secondary structure (DSSP)



S

TTT






SBSS

S





SSSSTT
 .........360.........370.........380.........390.........400.........410.
Sequence ALAEGDYLVIRSTGAYGSTMSSNYNSRCRAAEILVDGEKAFIVREREELKDLWRGEHILPI
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Known secondary structure (DSSP)

TT
S
SSSSGGG


GGG



TT



GGGTTTT




-


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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