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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xfeA_

Fold library idPDB HeaderMoleculeTitle
c4xfeA_PDB header: transport proteinChain: A: PDB Molecule: trap dicarboxylate transporter subunit dctp;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 pseudomonas putida f1 (pput_1203), target efi-500184, with bound d-3 glucuronate


Added to library: Sat Jan 31 08:25:55 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LDIKFAEIHPAGYPTVVAEQNXGKKLEQASNGDITFKXFAGGVLGSEKEVIEQAQIGAVQXTRVSLGIVG
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Known secondary structure (DSSP)

SS
TT
TTTSS
TTTT

TTSS


GGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence PVVPDVNVFNXPFVFRDHDHXRKIIDGEIGQEILDKITNSDFNLVALAWXDGGSRSIYTKKPVRSLEDLK
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Known secondary structure (DSSP) TTSGGGGGGGSTTSSSSSTSSSS



SS


SGGGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GXKIRVQGNPLFIDXXNAXGGNGIAXDTGEIFSALQTGVIDGAENNPPTLLEHNHFQSAKYYTLTGHLIL
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Known secondary structure (DSSP) T

S
TTS

GGGTSSS
TTGGGT



 .........220.........230.........240.........250.........260.........270.........280
Sequence PEPVVXSKTTWNKLTPEQQVLVKKVAREAQXEERALWDAKSAASEEKLKAAGVEFITVDKKPFYDATASV
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Known secondary structure (DSSP)
TTS
TT



ST
 .........290.........300......
Sequence REKYGAQYADLXKRIDAVQAENLYFQ
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Known secondary structure (DSSP) GGG

S


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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