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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xeqC_

Fold library idPDB HeaderMoleculeTitle
c4xeqC_PDB header: transport proteinChain: C: PDB Molecule: trap dicarboxylate transporter, dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio vulgaris (deval_0042, target efi-510114) bound to3 copurified (r)-pantoic acid


Added to library: Sat Jan 31 08:25:20 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EDITLAVVTKPGSAQYVCAERFAQLLAERSDKRFNVVLHHSASLGTETDILQQVQLGAVQXAIVTTGTLD
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Known secondary structure (DSSP)

SS
TTSTTS

TTTT
STSS
GGGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AFVPEXAALDFPFLFTDTTTADRVLDGPVGRGLLDRLSTAGFKGLHFSENGFRHLTNSIRPVXTPDDVRG
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Known secondary structure (DSSP) GT
GGGGGGG
TTS
SSSGGGGTSS


SSTTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LKIRVXESQVHRELWRTLGANPTPXGWPIYAELQQGTLDGQENPLWVIAEYRLNEVQKHLSLTGHVYSTH
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Known secondary structure (DSSP)

B
S
T




S

TTSSS
TTGGGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence TDLANLAWFEALPANDRRLLASCXQDAALWQRTWSRQRDAAYLEQLRTAGXQVIERPDIATFRQRVQPLS
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Known secondary structure (DSSP) TS
TTTT
SS

TGGGG
 .........290.........300..
Sequence GSALFEHKGVRKALEDLXAATR
Predicted secondary structure



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Known secondary structure (DSSP) GSSGGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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