Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xeoB_

Fold library idPDB HeaderMoleculeTitle
c4xeoB_1.38PDB header: ligaseChain: B: PDB Molecule: alanine--trna ligase, cytoplasmic;


Added to library: Sat Jan 2 08:16:51 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STLTASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANT
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)



TT





SS
SS
TT
SS

SGGGGGTT
S
TTSGGGG
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QKCIRADLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEFGIPIERLYVTYFGGDEAAGLE
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)


GGGTTSSSS

SSSSS
TTS


GGG

BTTTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence ADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNL
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)

TT

GGG

SSSSSS
SS

GGGTTS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VFIQYNREADGILKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAED
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)
TTS
TT
SSGGGSTTT








GGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILHRAVRYAHEKLNASRGFFATLVDVVVQSL
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TTSTT



SSS


TT
 .........360.........370........
Sequence GDAFPELKKDPDMVKDIINEEEVQFLKT
Predicted secondary structure


SS confidence



























Known secondary structure (DSSP) TTT
GGGGS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D