PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4xdqA_

Fold library id	PDB Header	Molecule	Title
c4xdqA_	PDB header: hydrolase	Chain: A: PDB Molecule: glycoside hydrolase family protein;	PDBTitle: crystal structure of a glycoside hydrolase family protein (rv03152 ortholog) from mycobacterium thermorestibile

Links to external resources
Added to library: Sat Jan 17 08:26:39 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L L F A D E F D G P A G S P P D P A K W F I V P E R E T I R N P V E W D K P Y N M G R Y V T D Q E H V F H D G N G N L V I R A T R G P G A N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T T
S
S S
G G G S G G G B
S T T T
S S S
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I R E K Y A S A K I V G L W R G G V G T T W E A R V K L N C L T D G A W P A F W L L N D D P V R G A E I D I F E W Y G N R D W P S G A T V H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S T T
T T T
T T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A K L D G T M F Q T Q N Y P V D S A W H T W R M T W L P S G M Y F W Q D Y E P G K E P F F T V L A N S L P E W P F N D P G Y T M V P V F N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T S S S
S S
T T S
T T
S G G G S S
G G G S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .

Sequence A V G G S G G R E P A G G S Y P A D M I I D W I R V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
T T S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	L	F	A	D	E	F	D	G	P	A	G	S	P	P	D	P	A	K	W	F	I	V	P	E	R	E	T	I	R	N	P	V	E	W	D	K	P	Y	N	M	G	R	Y	V	T	D	Q	E	H	V	F	H	D	G	N	G	N	L	V	I	R	A	T	R	G	P	G	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T			S		T	T	T						S					S	S			G	G	G	S	G	G	G	B						S	T	T	T					S	S	S										S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	R	E	K	Y	A	S	A	K	I	V	G	L	W	R	G	G	V	G	T	T	W	E	A	R	V	K	L	N	C	L	T	D	G	A	W	P	A	F	W	L	L	N	D	D	P	V	R	G	A	E	I	D	I	F	E	W	Y	G	N	R	D	W	P	S	G	A	T	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S					T	T													S	T	T												T	T	T											T	T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	K	L	D	G	T	M	F	Q	T	Q	N	Y	P	V	D	S	A	W	H	T	W	R	M	T	W	L	P	S	G	M	Y	F	W	Q	D	Y	E	P	G	K	E	P	F	F	T	V	L	A	N	S	L	P	E	W	P	F	N	D	P	G	Y	T	M	V	P	V	F	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T	S	S	S										S	S										T	T							S			T	T				S					G	G	G	S	S			G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Sequence	A	V	G	G	S	G	G	R	E	P	A	G	G	S	Y	P	A	D	M	I	I	D	W	I	R	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B								T	T	S		S	S