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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xd7B_

Fold library idPDB HeaderMoleculeTitle
c4xd7B_PDB header: hydrolaseChain: B: PDB Molecule: atp synthase subunit alpha;PDBTitle: structure of thermophilic f1-atpase inhibited by epsilon subunit


Added to library: Sat Aug 29 08:21:45 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDVGTVIQVGDGIARAHGLDNVXSGELVEFANGVXGXALNLEENNVGIVILGPYTGIKEGDEVRRTGRIX
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Known secondary structure (DSSP)


TT

TT

TT
TTS

SS
S

TT

TT


S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EVPVGEALIGRVVNPLGQPVDGLGPVETTETRPIESPAPGVXDRRSVHEPLQTGIKAIDALVPIGRGQRE
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Known secondary structure (DSSP)
SGGGTT

TT

B
SSS






SS




GGG




S



S
TT
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIIGDRQTGKTSVAIDTIINQKDQNXISIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLL
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Known secondary structure (DSSP)

TTSSTTTTTT
S

TT
GGG
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FLAPYAGVAXGEYFXYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAADAK
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Known secondary structure (DSSP) TTT


TTT



GGG

TTTT



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence GGGLTALPFVETQAGDISAYIPTNVISITDQIFLQSDLFFSGVRPAINAGLSVSRVAAQIKAXKKGARTV
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Known secondary structure (DSSP)






SSS
TTSTT



ST
-


B
TTT






S
STTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence EVLKQDLHQPPVEKQVLIIYAFLDDIPVEDVRRFEKEFYLFLDQNGQHLLEHIRTTKDLPLNKAIEAFKK
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Known secondary structure (DSSP)


TT


TT


TTS
TTS




TT
-

SS
 ...
Sequence TFV
Predicted secondary structure
SS confidence


Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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