PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4xcxA_

Fold library id	PDB Header	Molecule	Title
c4xcxA_	PDB header: transferase	Chain: A: PDB Molecule: small rna 2'-o-methyltransferase;	PDBTitle: methyltransferase domain of small rna 2'-o-methyltransferase

Links to external resources
Added to library: Sat Jan 17 09:06:23 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q F K P P L Y R Q R Y Q F V K N L V D Q H E P K K V A D L G C G D T S L L R L L K V N P C I E L L V G V D I N E D K L R W R G D S L A P F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T
T T S T T S T T
S S
T G G G T T S S G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G D F L K P R D L N L T I T L Y H G S V V E R D S R L L G F D L I T C I E L I E H L D S G D L A R F P E V V F G Y L S P S M I V I S T P N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B S S
T T S
G G G T T
S S
G G G S
T T T T
S
G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E F N P L D H K F E W T R M E F Q T W A L Y V A N R Y D Y S V E F T G V G E P P G A E N V G Y C T Q I G I F R K N Q H D Q H V Y K A V F T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T T
S
T T
G G G
S
S

. . . . . .

Sequence S Y P S L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	F	K	P	P	L	Y	R	Q	R	Y	Q	F	V	K	N	L	V	D	Q	H	E	P	K	K	V	A	D	L	G	C	G	D	T	S	L	L	R	L	L	K	V	N	P	C	I	E	L	L	V	G	V	D	I	N	E	D	K	L	R	W	R	G	D	S	L	A	P	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																				S						T		T	T	S							T	T	S	T	T		S							S		T	G	G	G	T	T	S	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	D	F	L	K	P	R	D	L	N	L	T	I	T	L	Y	H	G	S	V	V	E	R	D	S	R	L	L	G	F	D	L	I	T	C	I	E	L	I	E	H	L	D	S	G	D	L	A	R	F	P	E	V	V	F	G	Y	L	S	P	S	M	I	V	I	S	T	P	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		B	S	S											T	T	S			G	G	G	T	T		S						S		G	G	G	S													T	T	T	T			S									G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	F	N	P	L	D	H	K	F	E	W	T	R	M	E	F	Q	T	W	A	L	Y	V	A	N	R	Y	D	Y	S	V	E	F	T	G	V	G	E	P	P	G	A	E	N	V	G	Y	C	T	Q	I	G	I	F	R	K	N	Q	H	D	Q	H	V	Y	K	A	V	F	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	T				S																			T	T															G	G	G			S																S
	.	.	.	.	.	.
Sequence	S	Y	P	S	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B