PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4xbsA_

Fold library id	PDB Header	Molecule	Title
c4xbsA_	PDB header: lyase	Chain: A: PDB Molecule: deoxyribose-phosphate aldolase;	PDBTitle: 2-deoxyribose-5-phosphate aldolase mutant - e78k

Links to external resources
Added to library: Sat Nov 7 08:20:59 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L T T E Q L A K Y I D H T N L K A D A T E A D I K Q T C D E A K K F N T A S V C V N S Y W I P F V T E Q L K G T D V N P I A V V G F P L G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T
S G G G T T S S
S T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M A T E S K I F E A T T A I D Q G A E E I D M V L N V G E L K G G N D E K V L A D I Q G L A D A V H A K G K I L K V I L E N A L L T K D E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S
T T
T T
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V R A C Q L S E K A G A D F V K T S T G F S T S G A K V E D V K L M R E T V G D R L G V K A S G G I H S R E E A L A M I D A G A S R M G V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S S S
T T S S S S
S T
S S

. . . . . . .

Sequence A T V A I L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	T	T	E	Q	L	A	K	Y	I	D	H	T	N	L	K	A	D	A	T	E	A	D	I	K	Q	T	C	D	E	A	K	K	F	N	T	A	S	V	C	V	N	S	Y	W	I	P	F	V	T	E	Q	L	K	G	T	D	V	N	P	I	A	V	V	G	F	P	L	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T								T	T																	T		S						G	G	G									T	T	S	S								S	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	A	T	E	S	K	I	F	E	A	T	T	A	I	D	Q	G	A	E	E	I	D	M	V	L	N	V	G	E	L	K	G	G	N	D	E	K	V	L	A	D	I	Q	G	L	A	D	A	V	H	A	K	G	K	I	L	K	V	I	L	E	N	A	L	L	T	K	D	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	T		S													T	T																			T	T									G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	R	A	C	Q	L	S	E	K	A	G	A	D	F	V	K	T	S	T	G	F	S	T	S	G	A	K	V	E	D	V	K	L	M	R	E	T	V	G	D	R	L	G	V	K	A	S	G	G	I	H	S	R	E	E	A	L	A	M	I	D	A	G	A	S	R	M	G	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S							S	S	S	S																T	T	S	S						S	S			S											T		S					S
	.	.	.	.	.	.	.
Sequence	A	T	V	A	I	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S