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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4x0pB_

Fold library idPDB HeaderMoleculeTitle
c4x0pB_PDB header: transferase/dnaChain: B: PDB Molecule: dna polymerase theta;PDBTitle: ternary complex of human dna polymerase theta c-terminal domain2 binding ddatp opposite a tetrahydrofuran ap site analog


Added to library: Sat Mar 21 08:31:14 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLSIIDVASDQNLFQTFIKEWRCKKRFSISLACEKIRDDTLVVGLAVCWGGRDAYYFSLLDPSLTLKDRM
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Known secondary structure (DSSP)





STTTT
S
S





SSSS






S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence WYLQSCLRKESDKECSVVIYDFIQSYKILLLSCGISLEQSYEDPKVACWLLDPDSQEPTLHSIVTSFLPH
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Known secondary structure (DSSP) B

SS



SS
TS



BS

TTS



T

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence ELPLLEGMETSQGIQSLGLNAGSEHSGRYRASVESILIFNSMNQLNSLLQKENLQDVFRKVEMPSQYCLA
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Known secondary structure (DSSP) TGGGGGGT


SS
TTTTTTTSTTT
STTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAGHSFSFTSSDDIAEVLFLELKLPPQFSTSKDVLN
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Known secondary structure (DSSP)

TT


S

TT
T







 .........290.........300.........310.........320.........330.........340.........350
Sequence KLKALHPLPGLILEWRRITNAITKVVFPLQREKCLNPFLGMERIYPVSQSHTATGRITFTEPNIQNVPRD
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Known secondary structure (DSSP)

SSSTTTTTT


B



SSS


B
SS

TT



 .........360.........370.........380.........390.........400.........410.........420
Sequence FEIKMGMPFSISMRHAFVPFPGGSILAADYSQLELRILAHLSHDRRLIQVLNTGADVFRSIAAEWKMIEP
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Known secondary structure (DSSP)



SGGG



TTSS


SSTTTS

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYTGINQFMTETVKNCKRDGFVQ
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Known secondary structure (DSSP) S


TT

T


S
 .........500.........510.........520.........530.........540.........550.........560
Sequence TILGRRRYLPGIKDNNPYRKAHAERQAINTIVQGSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQS
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Known secondary structure (DSSP)
TTS


GGG
SSSSS
S
T
 .........570.........580.........590.........600.........610.........620.....
Sequence DCPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDFDV
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Known secondary structure (DSSP)




S
SSTTTSS


SS


STTS
B





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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