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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4wzzA_

Fold library idPDB HeaderMoleculeTitle
c4wzzA_PDB header: transport proteinChain: A: PDB Molecule: putative sugar abc transporter, substrate-binding protein;PDBTitle: crystal structure of an abc transporter solute binding protein2 (ipr025997) from clostridium phytofermentas (cphy_0583, target efi-3 511148) with bound l-rhamnose


Added to library: Sat Dec 20 08:33:40 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YATTATYAIIVKSAGNPYNQKESEGYKQVIEANGGKCVIQEPKSATAEDQITCINNAISQGVDCIAIAAN
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Known secondary structure (DSSP)





S
SS
TT


SSSST
S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DTDALEPALTEAKNQGIHVLSLDSATNANSRKVFVNQAGTTQIAQALXDAILDISGGSGDWAVLSAASTA
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Known secondary structure (DSSP) SSSTTTT
SS


GGG
S
SS
TTS
S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TNQNAWIDGXKTVXQDSKYSKLNLIGVYYGDDEYQASCDQTEAILAADPNIKVICAPTTVGIXAAAKVLQ
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Known secondary structure (DSSP) TTSGGGTT
TT

TT


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DKGLSGKVKLTGLGLPSEXADYIGDDDQHSCPYXFLWNPIQLGNLAAYASISLVNGTITGAADQSFTVPD
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Known secondary structure (DSSP) TT
TTTSB

GGGB
SSTT
SBS


TS

S
TT

S
 .........290.........300.........310.........320.
Sequence KTLGDNGSYKITAAADGGTEIILGAPFKFEPSNIAEWAKVY
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Known secondary structure (DSSP) TTSTBTT

TTSS




TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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