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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4wykC_

Fold library idPDB HeaderMoleculeTitle
c4wykC_PDB header: transport proteinChain: C: PDB Molecule: nuclear rna export factor 1;PDBTitle: structure of the lrr and ntf2-like domains of nxf1 complexed with nxt1


Added to library: Sat Feb 7 08:52:14 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLN
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Known secondary structure (DSSP)



TTTT
TTSTT
TT



TTS
S


 .........80.........90.........100.........110.........120.........130.........140
Sequence LSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI
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Known secondary structure (DSSP)
TTS

S
SGGGTT
TT


TT




GGGGGGG
SS

S
TTSGGGGT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYH
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Known secondary structure (DSSP)
TT

TT
S
















S
B
SSS
GGGGGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DGACCSLSIPFIPPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVVDI
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Known secondary structure (DSSP)





TT
GGGGGGGT


TTT


SB
SS


TTT
 .........290.........300.........310.........320.........330.........340......
Sequence SAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNASSEEIQRAFA
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Known secondary structure (DSSP)
SS

SSSGGG

STT


TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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