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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4wwvA_

Fold library idPDB HeaderMoleculeTitle
c4wwvA_PDB header: hydrolaseChain: A: PDB Molecule: aminopeptidase from family m42;PDBTitle: aminopeptidase apdkam598 from the archaeon desulfurococcus2 kamchatkensis


Added to library: Sat Mar 7 08:25:56 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EWRGQYIELIKKLTSLHAPSGREDPVKDLVAELMKSHVDKLWIDVWGNVVGYRKGSKGSGKIMIAAHMDE
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Known secondary structure (DSSP)
SS

BTT

GGG
S
TT



SSS



B
 .........80.........90.........100.........110.........120.........130.........140
Sequence IGLFISHIEDDGFLRVIPIGGVLERTLLYQRVVVRTRDGRLYRGVIGLKPPHVEAQKVPELRELFIDVGA
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Known secondary structure (DSSP)

TTS
SS

GGGTTT

SSS




S








GGG

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SSKEEVEKMGIRVGDIAVFDREVAELGWNRITSKAFDDRVGVVVMLKALEMLEKHDVDVYLVATVQEEVG
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Known secondary structure (DSSP) SSTTT

TT




TTT
S
S



SSS

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LKGAKTSAYGISPDVALAIDVTIASDVPGVAKSEWFTRLGYGPAIKIVDGRNAGGLIAHPKVGEFLVSIA
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Known secondary structure (DSSP) S

S


STTS
TTS

S
TTS

STTS
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence EKKRIPYQLDVISGGTTDASTIALNKEGVAAGTISIPSRYIHSPVEVVDLRDLYNASLLAKAFIEEATPE
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Known secondary structure (DSSP) TT



SS


TTTSTT

STTSSS


TT
 .........360.
Sequence WIQSIKGVVIK
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Known secondary structure (DSSP) TTSSTT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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