PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4wwsE_

Fold library id	PDB Header	Molecule	Title
c4wwsE_	PDB header: oxidoreductase	Chain: E: PDB Molecule: putative heme-dependent peroxidase lmo2113;	PDBTitle: structure of chlorite dismutase-like protein from listeria2 monocytogenes

Links to external resources
Added to library: Sat Feb 7 08:38:40 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V K T L D G W F C L H D F R S I D W A A W R E L N P G N Q E L M L N E L S H F L S D M E I T K N I G E G E H T I Y S I L G Q K A D L V F F T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
S T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L R D S L E A L N E V E N R F N K L A I A D Y L L P T Y S Y I S V V E L S N Y L A S H M A G G D D P Y Q N K G V R A R L Y P A L P P K K H I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T S G G G G G S S S
S S
S S
G G G
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C F Y P M S K K R D G A D N W Y M L P M E E R Q Q L I R D H G L I G R S Y A G K V Q Q I I G G S I G F D D Y E W G V T L F S D D A L E F K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G S
T T T T
T T T S S S S S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence I V T E M R F D E A S A R Y A E F G S F F I G N L L L S E Q L S K L F T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	K	T	L	D	G	W	F	C	L	H	D	F	R	S	I	D	W	A	A	W	R	E	L	N	P	G	N	Q	E	L	M	L	N	E	L	S	H	F	L	S	D	M	E	I	T	K	N	I	G	E	G	E	H	T	I	Y	S	I	L	G	Q	K	A	D	L	V	F	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S																									T	T	S										S	T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	R	D	S	L	E	A	L	N	E	V	E	N	R	F	N	K	L	A	I	A	D	Y	L	L	P	T	Y	S	Y	I	S	V	V	E	L	S	N	Y	L	A	S	H	M	A	G	G	D	D	P	Y	Q	N	K	G	V	R	A	R	L	Y	P	A	L	P	P	K	K	H	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S													T	S	G	G	G	G	G															S	S	S		S	S			S	S			G	G	G									S							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	F	Y	P	M	S	K	K	R	D	G	A	D	N	W	Y	M	L	P	M	E	E	R	Q	Q	L	I	R	D	H	G	L	I	G	R	S	Y	A	G	K	V	Q	Q	I	I	G	G	S	I	G	F	D	D	Y	E	W	G	V	T	L	F	S	D	D	A	L	E	F	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T			G	G	G	S																			T	T	T	T									T	T	T	S	S	S	S								S		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	I	V	T	E	M	R	F	D	E	A	S	A	R	Y	A	E	F	G	S	F	F	I	G	N	L	L	L	S	E	Q	L	S	K	L	F	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S																				G	G	G					T