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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4wwhA_

Fold library idPDB HeaderMoleculeTitle
c4wwhA_PDB header: transport proteinChain: A: PDB Molecule: abc transporter;PDBTitle: crystal structure of an abc transporter solute binding protein2 (ipr025997) from mycobacterium smegmatis (msmeg_1704, target efi-3 510967) with bound d-galactose


Added to library: Sat Nov 29 08:52:06 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKGTVGIAXPTKSSERWVADGQNXVDQFKAFGYDTDLQYGDDVVQNQVSQIENXITKGVKLLVIAPIDGS
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Known secondary structure (DSSP)




SSSTTT

TT
TT
S

SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLTNTLQHAADLKIPVISYDRLIKGTPNVDYYATFDNTKVGVLQANYIVDTLGVADGKGPFNLELFAGSP
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Known secondary structure (DSSP) S
TT

SS


S
S



TGGGT



B

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence DDNNATYFFQGAXSVLQPYIDSGKLVVKSGQTTFDQIATLRWDGGLAQSRXDNLLSQAYTSGRVDAVLSP
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Known secondary structure (DSSP) T
TTS
TT


SB
GGG
T
SSS



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence YDGISRGVISALKSAGYGNAAKPLPIVTGQDAELASVKSIVAGEQTQTVFKDTRELAKAAVQEADAVLTG
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Known secondary structure (DSSP) STT
SBTTB




SS

TTSS



TT
 .........290.........300.........310.........320.........
Sequence GTPQVNDTETYDNGVKVVPSYLLDPVSVDKSNYKKVLIDSGYYTETQVQ
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Known secondary structure (DSSP)




SBSSS
B
SS
B




TTTTTTSSS
TGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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