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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4wu0B_

Fold library idPDB HeaderMoleculeTitle
c4wu0B_PDB header: hydrolaseChain: B: PDB Molecule: similar to yter (bacilus subtilis);PDBTitle: structural analysis of c. acetobutylicum atcc 824 glycoside hydrolase2 from family 105


Added to library: Sat Jul 11 08:20:19 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QKYSKLMADSIIAKNITLTDHWGYEYGLTLDGIAKVYEWTKDKKYLDFIIKTMDTFINEDGTINGYKLEE
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Known secondary structure (DSSP)

TT



SS



TTTB
TTS
BTT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence YNIDHLNNGKILITLFKETGKEKYRKALINLRKQIDNHPRTKENVFWHKNIYPHQIWLDGLYMGATFYAK
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Known secondary structure (DSSP)
BGGGGTT



B
TTS
B
SBTTSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YVKEFGEEKEFDDITHQFIITEKNLKDNKTGLLYHAYDESKTEPWSNSETGLSPHFWGRAMGWYVMALAD
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Known secondary structure (DSSP) S
TTB
TTT

B
STT

STTS
TTT
B
S

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence TIEVLPKNHKDRNALIKILNNCVTALLKVQDNASKVWYQVLDEGERKGNYLEASGSSMIVYALLKGVRLG
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Known secondary structure (DSSP) S
TT
TTS
TTTSS
BSBTT
TTSTT

B
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence YLPESLKETAKEAYKGLINEFILETKDGLINLNKICYVAGLGGKDKRDGSFAYYISEPIVSNEPKGLGPF
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Known secondary structure (DSSP) SS
GGG
TTS







BTTTTB


S
SS
 .........360
Sequence LLASYEYETL
Predicted secondary structure
SS confidence









Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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