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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4wsrA_

Fold library idPDB HeaderMoleculeTitle
c4wsrA_PDB header: viral proteinChain: A: PDB Molecule: hemagglutinin;PDBTitle: the crystal structure of hemagglutinin form a/chicken/new york/14677-2 13/1998


Added to library: Sat Feb 28 08:13:03 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DKICIGYHANNSTTQVDTILEKNVTVTHSVELLETQKESRFCRVLNKAPLDLGDCTTEGWILGNPRCDKL
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Known secondary structure (DSSP)
B

S




SS
SSBS




BSSBTTB


TTB
T
GGGGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGDRSWSYIVERPDAQNGICYPGVLKEAEELKALIGSIDTIQRFEMFPKSTWTGVDTNSGVTSACTYNGG
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Known secondary structure (DSSP)
S

S

TT

BS

S


BTTTSS
GGGS
SSB
S


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SSFYRNLLWIIKIRSDPYSLIKGTYTNTGSQSILYFWGVHHPPDDVEQANLYGLGTRYVRMGTESMNFAK
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Known secondary structure (DSSP)

TT
B

SSS





SSS
SST
SS



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GPEIADRPPANGQRGRIDYYWSVLKPGETLNVESNGNLIAPWYAYKFTSSRHKGAIFRSDLPIENCDAVC
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Known secondary structure (DSSP)








BTTBS

TT
SS


SS







S
 .........290.........300.........310.........320.........330.........340.........350
Sequence QTLTGAINTNKTFQNVSPIWIGECPKYVKSKSLKLATGLRNVPQGGWTGMVDGWYGYHHENSQGSGYAAD
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Known secondary structure (DSSP) TT



S
S
S
S


S
S


S
B

B

BBTT

S
STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KESTQKAIDGITNKVNSIIDKMNTQFEAVEHEFSNLEKRISNLNKRMEDGFLDVWTYNAELLVLLENERT
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Known secondary structure (DSSP) T











TT
 .........430.........440.........450.........460.........470.........480...
Sequence LDMHDANVKNLHEKVKSQLRDNAKDLGNGCFEFWHKCDNECINSVKNGTYNYPKYQEESRLNR
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Known secondary structure (DSSP) GGG
TTSSSS


TT


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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