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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4wkkA_

Fold library idPDB HeaderMoleculeTitle
c4wkkA_PDB header: signaling proteinChain: A: PDB Molecule: bacteriophytochrome protein;PDBTitle: the photosensory module (pas-gaf-phy) of the bacterial phytochrome2 agp1 (atbphp1) in the pr form, chromophore modelled with an exocyclic3 double bond at pyrrole ring a.


Added to library: Sat Dec 26 08:20:52 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LDSCGAEPIHIPGAIQEHGALLVLSAREFSVVQASDNLANYIGVDLPIGAVATEANLPFISVLSAWYSGA
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Known secondary structure (DSSP)

S
TT

S
TTTTT
BTTSS


TT
B

TTT
TTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ASNFRYAWAEKKLDVSAHRSGTLVILEVEKAGVGESAEKLMGELTSLAKYLNSAPSLEDALFRTAQLVSS
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Known secondary structure (DSSP)
SGGGTTT

SS

TT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ISGHDRTLIYDFGLDWSGHVVAEAGSGALPSYLGLRFPAGDIPPQARQLYTINRLRMIPDVDYKPVPIRP
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Known secondary structure (DSSP)

S
TTS

SSS


TT

GGGS


S
TT


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence EVNAETGAVLDMSFSQLRSVSPVHLEYMRNMGTAASMSVSIVVNGALWGLIACHHATPHSVSLAVREACD
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Known secondary structure (DSSP) SS
TTTSS



TT
TTB


T
STTSS




 .........290.........300.........310.........320.........330.........340.........350
Sequence FAAQLLSMRIAMEQSSQDASRRVELGHIQARLLKGMAAAAAWVDGLLGGEGEREDLLKQVGADGAALVLG
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Known secondary structure (DSSP) SSSTTSSTTT
ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence DDYELVGNTPSREQVEELILWLGEREIADVFATDNLAGNYPTAAAYASVASGIIAMRVSELHGSWLIWFR
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Known secondary structure (DSSP) TS


TS

SS
S

GGGGGGS
SSSTT
 .........430.........440.........450.........460.........470.........480........
Sequence PEVIKTVRWGGDPHKTVQESGRIHPRKSFEIWKEQLRNTSFPWSEPELAAARELRGAIIGIVLRKTEE
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Known secondary structure (DSSP)



S
TT
TT
S

S
S








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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