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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4wj3E_

Fold library idPDB HeaderMoleculeTitle
c4wj3E_PDB header: ligase/rnaChain: E: PDB Molecule: aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;PDBTitle: structure of protein-trna complex


Added to library: Sat Jan 3 08:14:51 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WETVIGLEIHAQLATQSKIFSGSSTAFGAAPNTQASLVDLAMPGTLPVLNEEAVRMACLFGLAIDARIDR
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Known secondary structure (DSSP)


B

SB
SSS
SB
S

SSTTTT

TTTTT
TT





TT



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QNVFARKNYFYPDLPKGYQTSQMDHPIVGKGHLDITLEDGTTKRIGITRAHLEEDAGKSLHEDGMSGIDL
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Known secondary structure (DSSP)




TT
SSS
SSS
S

SSS






T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NRAGTPLLEIVSEPDIRSAKEAVAYVKAIHALVRYLGICDGNMAEGSLRCDCNVSVRPKGQAEFGTRAEI
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Known secondary structure (DSSP) TSTT

TT

STSB


TTTT

TT
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence KNVNSFRFIEKAINHEIQRQIELIEDGGKVVQETRLYDPNKDETRSMRGKEEANDYRYFPCPDLLPVVIE
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Known secondary structure (DSSP)
S
S



TTTT

S






B
SSS



 .........290.........300.........310.........320.........330.........340.........350
Sequence PEYLAKLREQLPELPVQKRERFESQYGLSAYDASVLSASREMADYFEKVQGICGDAKLAANWVMVELGSL
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Known secondary structure (DSSP)



TTT

TT
TS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LNKDGLEIEQSPVSAEQLGGMILRIKDNTISGKLAKMVFEAMANGEGSAXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

SSTTSS

TTS
SSS






SSTT
 .........430.........440.........450.....
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTS
S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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