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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4witB_

Fold library idPDB HeaderMoleculeTitle
c4witB_PDB header: lipid transportChain: B: PDB Molecule: predicted protein;PDBTitle: tmem16 lipid scramblase in crystal form 2


Added to library: Sat Nov 15 08:21:28 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVDFVIHYKVPAAERDEAEAGFVQLIRALTTVGLATEVRHGENESLLVFVKVASPDLFAKQVYRARLGDW
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Known secondary structure (DSSP)





S

S
TTTSTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence LHGVRVSAPHNDIAQALQDEPVVEAERLRLIYLMITKPHNEWKHVESIFPLHSHSFNKEWIKKWSSKYTL
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Known secondary structure (DSSP) TTSSSS

TT

TTGGGGS


STT



SB


B




SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EQTDIDNIRDKFGESVAFYFAFLRSYFRFLVIPSAFGFGAWLLLGQFSYLYALLCGLWSVVFFEYWKKQE
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Known secondary structure (DSSP)

TTT
SS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VDLAVQWGVRGVSSIQQSRPEFEWEHEAEDPITGEPVKVYPPMKRVKTQLLQIPFALACVVALGALIVTC
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Known secondary structure (DSSP) TT
TTGGGTS
B
TT


S
TTT
S

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence NSLEVFINEVYSGPGKQYLGFLPTIFLVIGTPTISGVLMGAAEKLNAMENYATVDAHDAALIQKQFVLNF
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Known secondary structure (DSSP) T

SS
TT

SB
 .........360.........370.........380.........390.........400.........410.........420
Sequence MTSYMALFFTAFVYIPFGHILHPFLNFWRATAQTLTFSEKELPTREFQINPARISNQMFYFTVTAQIVNF
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Known secondary structure (DSSP) TTTTT
GGG
SSS









TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence ATEVVVPYIKQQAFQAEFLQRVREECTLEEYDVSGDYREMVMQFGYVAMFSVAWPLAACCFLVNNWVELR
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Known secondary structure (DSSP) T

S
B

GGG
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence SDALKIAISSRRPIPWRTDSIGPWLTALSFLSWLGSITSSAIVYLCSNASPLKAWGLLLSILFAEHFYLV
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Known secondary structure (DSSP) TSB






SS
TTS





TTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence VQLAVRFVLSKLDSPGLQKERKERFQTKKRLLQENLGQDAAAAPGIEHSEKITREALEEEARQASIEMFW
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Known secondary structure (DSSP) TS

TS






GGG


SS
 .........640.........650....
Sequence QRQRGMQETIEIGRRMIEQQLAAG
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Known secondary structure (DSSP)



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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