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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4wgkB_

Fold library idPDB HeaderMoleculeTitle
c4wgkB_PDB header: hydrolaseChain: B: PDB Molecule: neutral ceramidase;PDBTitle: crystal structure of human neutral ceramidase with zn-bound phosphate


Added to library: Sat Jul 11 08:22:36 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FSGYHIGVGRADCTGQVADINLMGYGKSGQNAQGILTRLYSRAFIMAEPDGSNRTVFVSIDIGMVSQRLR
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Known secondary structure (DSSP)

S



SSS

TT
SS


TTS
S
SSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence LEVLNRLQSKYGSLYRRDNVILSGTHTHSGPAGYFQYTVFVIASEGFSNQTFQHMVTGILKSIDIAHTNM
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Known secondary structure (DSSP) TTSS
SSS


S





STS

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence KPGKIFINKGNVDGVQINRSPYSYLQNPQSERARYSSNTDKEMIVLKMVDLNGDDLGLISWFAIHPVSMN
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Known secondary structure (DSSP)

SS
SSTTS
TT
S
SS

TT







SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NSNHLVNSDNVGYASYLLEQEKNKGYLPGQGPFVAAFASSNLGDVSPNILGPRCINTGESCDNANSTCPI
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Known secondary structure (DSSP) TT



STT

TT
SS


S
TTS
TT
TTT

B

STT


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GGPSMCIAKGPGQDMFDSTQIIGRAMYQRAKELYASASQEVTGPLASAHQWVDMTDVTVWLNSTHASKTC
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Known secondary structure (DSSP) T
GGG

SSSST


S
TTS
SSSS


 .........360.........370.........380.........390.........400.........410.........420
Sequence KPALGYSFAAGTIDGVGGLNFTQGKTEGDPFWDTIRDQILGKPSEEIKECHKPKPILLHTGELSKPHPWH
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Known secondary structure (DSSP) S

GGGGGTT
SS


TT

S

T



TT


GGG

SSS
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PDIVDVQIITLGSLAITAIPGEFTTMSGRRLREAVQAEFASHGMQNMTVVISGLCNVYTHYITTYEEYQA
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Known secondary structure (DSSP)
STT
SS
TT

S

SBSS

B

 .........500.........510.........520.........530.........540.........550.........560
Sequence QRYEAASTIYGPHTLSAYIQLFRNLAKAIATDTVANLSRGPEPPFFKQLIPSIVDRAPKGRTFGDVLQPA
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Known secondary structure (DSSP)

TBTT
TTTT
GGGS








S










TT

TT


 .........570.........580.........590.........600.........610.........620.........630
Sequence KPEYRVGEVAEVIFVGANPKNSVQNQTHQTFLTVEKYEATSTSWQIVCNDASWETRFYWHKGLLGLSNAT
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Known secondary structure (DSSP)
STTS


GGGG
S

S


STTTTTTSTT
STT
 .........640.........650.........660.........670..
Sequence VEWHIPDTAQPGIYRIRYFGHNRKQAVILSFEGTSPAFEVVT
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Known secondary structure (DSSP)

TT









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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