PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4wf9C_

Fold library id	PDB Header	Molecule	Title
c4wf9C_	PDB header: ribosome	Chain: C: PDB Molecule: 50s ribosomal protein l4;	PDBTitle: the crystal structure of the large ribosomal subunit of staphylococcus2 aureus in complex with telithromycin

Links to external resources
Added to library: Sat Oct 24 14:01:23 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N Y D V L K L D G T K S G S I E L S D A V F G I E P N N S V L F E A I N L Q R A S L R Q G T H A V K N R S A V S G G G R K P W K Q K G T G R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T
T T T S S
S
S S
S S S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A R Q G T I R A P Q W R G G G I V F G P T P R S Y A Y K M P K K M R R L A L R S A L S F K A Q E N G L T V V D A F N F E A P K T K E F K N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S T T S T T
S S
S
S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200

Sequence L S T L E Q P K K V L V V T E N E D V N V E L S A R N I P G V Q V T T A Q G L N V L D I T N A D S L V I T E A A A K K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S B
B S S
T T T T T
S T T B
B T T T
T T
S S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	Y	D	V	L	K	L	D	G	T	K	S	G	S	I	E	L	S	D	A	V	F	G	I	E	P	N	N	S	V	L	F	E	A	I	N	L	Q	R	A	S	L	R	Q	G	T	H	A	V	K	N	R	S	A	V	S	G	G	G	R	K	P	W	K	Q	K	G	T	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T														S	S																		T										T	T	T	S	S				S		S	S		S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	R	Q	G	T	I	R	A	P	Q	W	R	G	G	G	I	V	F	G	P	T	P	R	S	Y	A	Y	K	M	P	K	K	M	R	R	L	A	L	R	S	A	L	S	F	K	A	Q	E	N	G	L	T	V	V	D	A	F	N	F	E	A	P	K	T	K	E	F	K	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		T	T	S	T	T	S	T	T				S	S																																									S			S						T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Sequence	L	S	T	L	E	Q	P	K	K	V	L	V	V	T	E	N	E	D	V	N	V	E	L	S	A	R	N	I	P	G	V	Q	V	T	T	A	Q	G	L	N	V	L	D	I	T	N	A	D	S	L	V	I	T	E	A	A	A	K	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	B				B	S	S			T	T	T	T	T				S	T	T	B				B	T	T	T			T	T						S	S					S