Fold library entry viewer: c4wd9B_

Added to library: Sat Nov 1 08:26:41 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	F	K	A	Q	P	F	L	V	R	N	T	I	L	C	P	N	D	K	R	S	F	T	E	Y	T	Q	V	I	E	T	V	S	K	N	K	V	F	L	E	Q	L	L	L	A	N	P	K	L	Y	D	V	M	Q	K	Y	N	A	G	L	L	K	K	K	R	V	K	K	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B									S	S		G	G	G					S											T																							T	T	S		S		T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	S	I	Y	K	Y	Y	K	R	S	Y	L	R	S	T	P	F	G	L	F	S	E	T	S	I	G	V	F	S	K	S	S	Q	Y	K	L	M	G	K	T	T	K	G	I	R	L	D	T	Q	W	L	I	R	L	V	H	K	M	E	V	D	F	S	K	K	L	S	F	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S					B	T	T	T										S	S		B		B			S																									G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	N	A	N	Y	K	F	G	D	R	V	F	Q	V	Y	T	I	N	S	S	E	L	E	E	V	N	I	K	Y	T	N	V	Y	Q	I	I	S	E	F	C	E	N	D	Y	Q	K	Y	E	D	I	C	E	T	V	T	L	C	Y	G	D	E	Y	R	E	L	S	E	Q	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T					T	T					S	S			S	S		S	S																		T	T	T														T	T	T		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	S	L	I	V	N	H	Y	L	I	S	N	L	Q	K	D	L	L	S	D	F	S	W	N	T	F	L	T	K	V	E	A	I	D	E	D	K	K	Y	I	I	P	L	K	K	V	Q	K	F	I	Q	E	Y	S	E	I	E	I	G	E	G	I	E	K	L	K	E	I	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S				G	G	G	B	T	T	S	S	S															T	T		T	T																	S		S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	M	S	Q	I	L	E	N	D	N	Y	I	Q	I	D	L	I	S	D	S	E	I	N	F	D	V	K	Q	K	Q	Q	L	E	H	L	A	E	F	L	G	N	T	T	K	S	V	R	R	T	Y	L	D	D	Y	K	D	K	F	I	E	K	Y	G	V	D	Q	E	V	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S																	S																	G	G	G			B														S		S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	E	L	F	D	S	T	F	G	I	G	A	P	Y	N	Y	N	H	P	R	N	D	F	Y	E	S	E	P	S	T	L	Y	Y	S	E	E	E	R	E	K	Y	L	S	M	Y	V	E	A	V	K	N	H	N	V	I	N	L	D	D	L	E	S	H	Y	Q	K	M	D	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		T	T	T	S					T	T			T	T			S	S								B	S	S																		T	T					G	G	G	G									T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	K	S	E	L	Q	G	L	E	L	F	L	N	L	A	K	E	Y	E	K	D	I	F	I	L	G	D	I	V	G	N	N	N	L	G	G	A	S	G	R	F	S	A	L	S	P	E	L	T	S	Y	H	R	T	I	V	D	S	V	E	R	E	N	E	N	K	E	I	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T													S		T	T	T	T	T	T	T	T	G	G	G																						T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	C	E	I	V	F	L	P	E	N	I	R	H	A	N	V	M	H	T	S	I	M	R	R	K	V	L	P	F	F	T	S	T	S	H	N	E	V	L	L	T	N	I	Y	I	G	I	D	E	K	E	K	F	Y	A	R	D	I	S	T	Q	E	V	L	K	F	Y	I	T	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	G	G	G	G	G	G	S						S	S						S	S	B		S	S		B			G	G	G							T	T								T	T	T										S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	N	K	T	L	F	S	N	E	L	R	F	L	Y	E	I	S	L	D	D	K	F	G	N	L	P	W	E	L	I	Y	R	D	F	D	Y	I	P	R	L	V	F	D	E	I	V	I	S	P	A	K	W	K	I	W	G	R	D	V	N	S	K	M	T	I	R	E	L	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T	S	S										T	T	S		S		T	T									T	T		S								T	T												G	G	G			S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	K	E	I	P	K	E	F	Y	I	V	N	G	D	N	K	V	Y	L	S	Q	K	N	P	L	D	M	E	I	L	E	S	A	I	K	K	S	S	K	R	K	D	F	I	E	L	Q	E	Y	F	E	D	E	N	I	I	N	K	G	E	K	G	R	V	A	D	V	V	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			S						S	S	S							T	T																		T	T										B		S	S	S			S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	F	I	R	A	F	I	R	E	K	R	V	S	V	E	R	R	E	K	L	P	F	N	E	W	L	Y	L	K	L	Y	I	S	I	N	R	Q	N	E	F	L	L	S	Y	L	P	D	I	Q	K	I	V	A	N	L	G	G	N	L	F	F	L	R	Y	T	D	P	K	P	H	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				B	T	T	T																				T											T	T										S	S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	R	L	R	I	K	C	S	D	L	F	L	A	Y	G	S	I	L	E	I	L	K	R	S	R	K	N	R	I	M	S	T	F	D	I	S	I	Y	D	Q	E	V	E	R	Y	G	G	F	D	T	L	E	L	S	E	A	I	F	C	A	D	S	K	I	I	P	N	L	L	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S																		T	T	S													T	G	G	G	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	I	K	D	T	N	N	D	W	K	V	D	D	V	S	I	L	V	N	Y	L	Y	L	K	C	F	F	Q	N	D	N	K	K	I	L	N	F	L	N	L	V	I	F	Y	D	K	N	F	K	E	L	K	H	A	I	K	N	L	F	L	K	M	I	A	Q	D	F	E	L	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S																				T	T	S		S								T	T						T	T																		T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.
Sequence	V	Y	S	I	I	D	S	I	I	H	V	H	N	N	R	L	I	G	I	E	R	D	K	E	K	L	I	Y	Y	T	L	Q	R	L	F	V	S	E	E	T	K	D	F	N	L	D	L	V	S	V	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S			S	S															T	T				T	T

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PDB structure

FASTA sequence

Hidden Markov model

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