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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4wd3B_

Fold library idPDB HeaderMoleculeTitle
c4wd3B_PDB header: ligaseChain: B: PDB Molecule: l-amino acid ligase;PDBTitle: crystal structure of an l-amino acid ligase riza


Added to library: Sat Sep 12 08:24:16 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XVRILLINSDKPEPIQFFQKDKETNDSINISVITRSCYAPLYSHWADHVYIVDDVTDLTVXKSLXLEILK
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Known secondary structure (DSSP)

SS

TT
GGGGGGTTTT
S
S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VGPIDHIVSTTEKSILTGGFLRSYFGIAGPGFETALYXTNKLAXKTKLKXEGIPVADFLCVSQVEDIPAA
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Known secondary structure (DSSP)


S
STT
SS

TTT
T

B


S
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence GEKLGWPIIVKPALGSGALNTFIIHSLDHYEDLYSTSGGLGELKKNNSLXIAEKCIEXEEFHCDTLYADG
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Known secondary structure (DSSP)
SSSSS

TT


SSSSTTTTGGG

S




TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EILFVSISKYTIQGSFILSQNDPVYAEILELQKSVAQAFRITDGPGHLEIYRTHSGELIVGEIAXRIGGG
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Known secondary structure (DSSP)



TTSTTTT

S
TT

SS

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GISRXIEKKFNISLWESSLNISVYRDPNLTVNPIEGTVGYFSLPCRNGTIKEFTPIEEWEKLAGILEVEL
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Known secondary structure (DSSP) T


TT









SS



SSB



STT
 .........360.........370.........380........
Sequence LYQEGDVVDLARLYFCLENENEVQHLLALVKQTYYLHL
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Known secondary structure (DSSP) S

SS
B


SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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