PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4w9uD_

Fold library id	PDB Header	Molecule	Title
c4w9uD_	PDB header: oxidoreductase	Chain: D: PDB Molecule: acyl-coa dehydrogenase;	PDBTitle: crystal structure of an acyl-coa dehydrogenase from brucella2 melitensis

Links to external resources
Added to library: Sat Sep 13 08:39:41 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A A F A W E D P F L L E E Q L T E D E R M I R D S A K A F A S D V L L P R V E T D P E L F H L M G Q A G L L G V T L P E D Y G A A N A S Y V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T
G G G G S
T
T T
S S T T S
G G G T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A Y G L V A R E V E R I D S G Y R S M M S V Q S S L V M Y P I Y A Y G S D E Q R K K Y L P G L V S G E L I G C F G L T E P D A G S A G M K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
T S S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R A E K I D G G Y R L S G S K M W I S N S P I A D V F V V W A K S A A H D N A I R G F I L E K G M K G L S A P K I G G K S L R A S I T G E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T G G G
S T T T T T T T
T T
B
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V M D G V E V S E D A I L P N V S G L K G P F G C L N R A R Y G I S W G V L G A A E D C W F R A R Q Y G L D R K Q F N K P L A G T Q L Y Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G B
T T
S T
T T G G G S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence K L A D M Q T E I A L G I Q A S L R V G R L F D E G K M A P E M I S I V K R N N C G K A L D I A R Q A R D M H G E Y H V M R H A Q N L E T V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . .

Sequence N T Y E G T H D V H A L I L G R A Q T G I Q A F F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	A	F	A	W	E	D	P	F	L	L	E	E	Q	L	T	E	D	E	R	M	I	R	D	S	A	K	A	F	A	S	D	V	L	L	P	R	V	E	T	D	P	E	L	F	H	L	M	G	Q	A	G	L	L	G	V	T	L	P	E	D	Y	G	A	A	N	A	S	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	T	T		G	G	G	G	S																		T																		T	T		S	S	T	T	S		G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	Y	G	L	V	A	R	E	V	E	R	I	D	S	G	Y	R	S	M	M	S	V	Q	S	S	L	V	M	Y	P	I	Y	A	Y	G	S	D	E	Q	R	K	K	Y	L	P	G	L	V	S	G	E	L	I	G	C	F	G	L	T	E	P	D	A	G	S	A	G	M	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T														T	T								S															T	S	S									S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	A	E	K	I	D	G	G	Y	R	L	S	G	S	K	M	W	I	S	N	S	P	I	A	D	V	F	V	V	W	A	K	S	A	A	H	D	N	A	I	R	G	F	I	L	E	K	G	M	K	G	L	S	A	P	K	I	G	G	K	S	L	R	A	S	I	T	G	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T													T	G	G	G		S									T	T	T	T	T									T	T		T	T					B							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	M	D	G	V	E	V	S	E	D	A	I	L	P	N	V	S	G	L	K	G	P	F	G	C	L	N	R	A	R	Y	G	I	S	W	G	V	L	G	A	A	E	D	C	W	F	R	A	R	Q	Y	G	L	D	R	K	Q	F	N	K	P	L	A	G	T	Q	L	Y	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	B		T	T			S	T																																							T	T			G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	L	A	D	M	Q	T	E	I	A	L	G	I	Q	A	S	L	R	V	G	R	L	F	D	E	G	K	M	A	P	E	M	I	S	I	V	K	R	N	N	C	G	K	A	L	D	I	A	R	Q	A	R	D	M	H	G	E	Y	H	V	M	R	H	A	Q	N	L	E	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Sequence	N	T	Y	E	G	T	H	D	V	H	A	L	I	L	G	R	A	Q	T	G	I	Q	A	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S															S