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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4w9rA_

Fold library idPDB HeaderMoleculeTitle
c4w9rA_PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of uncharacterised protein coch_1243 from2 capnocytophaga ochracea dsm 7271


Added to library: Sat Sep 13 08:20:29 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVISETFSSGRLNRKQKIGIYKPEKYTDRQAYPLIVVLNAETLXEPVVSXVRYYEQFGEXPKCIVVGVYE
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Known secondary structure (DSSP)
TTTT

SS

TTS
TTTTSS




 .........80.........90.........100.........110.........120.........130.........140
Sequence PKQEDVTVVEEVGRPINESARFFEFVSAELVPYIQGKYPIADLKGVIASEEAGFLANYYXLAEKKPTFNX
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Known secondary structure (DSSP)




TTTSS

TTS
GGGGGG
SS

S
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IVSLNPVALPRXGEEFSHALAAGVPNRLFYYXATADVENKVVYDKAIQFERAXRSAPVHESVEYHFVDFK
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Known secondary structure (DSSP)


GGG

SS
T
SSS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GSSVNAAKLQGIAQALDXCFDIYKPIGGKEFKTQXETLETGIYEYLENKYNTIYKQLGVKKVPILNDVXA
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Known secondary structure (DSSP) TGGGS


TTT
SS







 .........290.........300.........310.........320.........330.........340.........350
Sequence TYTAINSSQDWESLKKLAKYVESNGYLKTAXPNFFLAEYYEKIGDDKKALKTYQKAYTEPNIDFITGDLI
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Known secondary structure (DSSP) TT
TT
TTSST
TTS

BTTB
 .........360
Sequence NERITHLQAT
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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