PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4w8wB_

Fold library id	PDB Header	Molecule	Title
c4w8wB_	PDB header: hydrolase	Chain: B: PDB Molecule: crispr system cmr subunit cmr4;	PDBTitle: crystal structure of oligomeric cmr4 from pyrococcus furiosus

Links to external resources
Added to library: Sat Oct 18 08:35:01 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S M K A Y L V G L Y T L T P T H P G S V D Q P I Q R E R H T G F P V I W G Q S L K G V L R S Y L K L V E K V D E E K I N K I F G P A G L I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
B B
S
B
T T T
B
T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V G D A K I L F F P V R S L K G V Y A Y V T S P L V L N R F K R D L E L A G V K N F Q T E I P E L T D T A I A S E E I T V D N K V I L E E F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S S S S
T
S S
G G G
S S S B S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A I L I Q K D D K G I L E S V V K A I E Q A F G N E M A E K I K G R I A I I P D D V F R D L V E L S T E I E E Y I P S D T L F Y S L I L V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
S S B
B B
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . .

Sequence P R A K D N D M A L I K E V L G K I N G K Y L Q I G G N E T V G K G F V K V T L K E V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G T T
B S
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	M	K	A	Y	L	V	G	L	Y	T	L	T	P	T	H	P	G	S	V	D	Q	P	I	Q	R	E	R	H	T	G	F	P	V	I	W	G	Q	S	L	K	G	V	L	R	S	Y	L	K	L	V	E	K	V	D	E	E	K	I	N	K	I	F	G	P	A	G	L	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S		B	B						S				B		T	T	T			B																		T	S																S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	G	D	A	K	I	L	F	F	P	V	R	S	L	K	G	V	Y	A	Y	V	T	S	P	L	V	L	N	R	F	K	R	D	L	E	L	A	G	V	K	N	F	Q	T	E	I	P	E	L	T	D	T	A	I	A	S	E	E	I	T	V	D	N	K	V	I	L	E	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													B	S	S	S	S																					T												S	S						G	G	G		S	S	S				B	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	I	L	I	Q	K	D	D	K	G	I	L	E	S	V	V	K	A	I	E	Q	A	F	G	N	E	M	A	E	K	I	K	G	R	I	A	I	I	P	D	D	V	F	R	D	L	V	E	L	S	T	E	I	E	E	Y	I	P	S	D	T	L	F	Y	S	L	I	L	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S																							T	T	S																S	S	B				B	B		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Sequence	P	R	A	K	D	N	D	M	A	L	I	K	E	V	L	G	K	I	N	G	K	Y	L	Q	I	G	G	N	E	T	V	G	K	G	F	V	K	V	T	L	K	E	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T														G	G	G	T	T						B	S		T	T	T	T