Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4w8aA_

Fold library idPDB HeaderMoleculeTitle
c4w8aA_PDB header: hydrolaseChain: A: PDB Molecule: exo-xyloglucanase;PDBTitle: crystal structure of xeg5b, a gh5 xyloglucan-specific beta-1,4-2 glucanase from ruminal metagenomic library, in the native form


Added to library: Sat Mar 14 08:28:48 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KDAQAIAKDMYPGWNLGNTLEATGSGLDAETSWQPTLTTQQIIDAVKAAGFKSVRIPCSWDIHSDSNGEI
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)

TTT
S
TTSTTS

SSGGGGGTSSS



T





GGGB
TTS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence DAQWMARVKQVVNYCINDGIYVVLNDHWDNGWIEVLGFSKSSSSYQAVDEATITSKITRLKDLWTQIANE
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
TT



GGGTTTTTTTBS
SSS

B

 .........150.........160.........170.........180.........190.........200.........210
Sequence FKDYDEHLLFAGLNEPFQEYSLFSGHHEELTPILCRYNQAFVEAVRATGGNNAQRTLVVQGPSTNINSSV
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TTT

TT

SSTT

TT
T
GGGGTS

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence NYMTADKLPETAGRLMVEVHYYDPGQFCGTFDASGDNAFYFWGAANHSTDHNATYGEEAYMLSQFGLLKT
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) S
GGGSSS
TTS

STSSS
SGGG


B
SGGG

SSSB

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AYTSLGYPVIIGEYAALQRTISGDQNKHNASVKYFYQCVNEYATNNGIIAFAWDTNDTNGLNSEGGSSTI
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TGGGT




B


SS
TT





GGGGSTT
B


 .........360.........370.........380......
Sequence IDRANSAVVGNNAMEGVKAGVAAGKWPFLEHHHHHH
Predicted secondary structure















SS confidence



































Known secondary structure (DSSP) GGGT








SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D