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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4w6vA_

Fold library idPDB HeaderMoleculeTitle
c4w6vA_PDB header: transport proteinChain: A: PDB Molecule: di-/tripeptide transporter;PDBTitle: crystal structure of a peptide transporter from yersinia2 enterocolitica at 3 a resolution


Added to library: Sat Jul 18 10:05:14 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STNTPGGRTFFGHPYPLSGLFLSEMWERFSFYGIRPLLILFMAATVFDGGMGLPREQASAIVGIFAGSMY
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Known secondary structure (DSSP)


STTTTTTTTTTS
TTTTS



 .........80.........90.........100.........110.........120.........130.........140
Sequence LAALPGGLLADNWLGQQRAVWYGSILIALGHLSIALSAFFGNDLFFIGLVFIVLGTGLFKTCISVMVGTL
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Known secondary structure (DSSP) TTTTTTTTTS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence YKPGDARRDGGFSLFYMGINMGSFIAPLLSGWLLRTHGWHWGFGIGGIGMLVALLIFRGFAIPAMKRYDA
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Known secondary structure (DSSP) S
TT
TS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence EVGLDSSWNKPTGRWVTAIMAVVVVIIALISQGVIPINPVMIASLLVYVIAASVTLYFIYLFAFAKMSRK
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Known secondary structure (DSSP) S


TTTSS


TS


T

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence DRARLLVCFILLVSAAFFWSAFEQKPTSFNLFANDYTDRMVMGFEIPTVWFQSINALFIILLAPVFSWAP
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Known secondary structure (DSSP) TTTTTSS


SSSS


GGGGGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence SSITKFVIGILCAAAGFAVMMYAAQHVLSSGGAGVSPLWLVMSILLLTLGELCLSPIGLATMTLLAPDRM
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Known secondary structure (DSSP)
TS

-
TTTTSS
TTT
 .........430.........440.........450.........460.........470.........480...
Sequence RGQVMGLWFCASSLGNLAAGLIGGHVKADQLDMLPTLFARCSIALVICAAVLILLIVPIRRLM
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Known secondary structure (DSSP) GGGTTS
STT
GGGT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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