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  | Protein Homology/analogY Recognition Engine V 2.0 |
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Fold library id | PDB Header | Molecule | Title |
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c4v1oS_ | PDB header: transcription | Chain: S: PDB Molecule: mediator of rna polymerase ii transcription subunit 6; | PDBTitle: architecture of the rna polymerase ii-mediator core2 transcription initiation complex |
Added to library: Sat Feb 7 08:40:31 2015 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | D | E | L | Q | W | K | S | P | E | W | I | Q | V | F | G | L | R | T | E | N | V | L | D | Y | F | A | E | S | P | F | F | D | K | T | S | N | N | Q | V | I | K | M | Q | R | Q | F | Y | M | Q | L | E | E | E | L | M | K | L | D | G | T | E | Y | V | L | S | S | V | R | E | P |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | T | T | T | T | T | S | T | T | T | T | S | T | T | S | S | B | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Sequence | D | F | W | V | I | R | K | Q | R | R | T | E | I | I | P | L | Q | D | Y | Y | I | I | G | A | N | I | Y | Q | S | P | T | I | F | K | I | V | Q | S | R | L | M | S | T | S | Y | H | L | N | S | T | L | E | S | L | Y | D | L | I | E | F | Q | P | S | Q | G | V | H | Y | K | |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | S | S | B | S | T | T | T | T | T |
Download: | PDB structure | FASTA sequence |
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