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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4v19E_

Fold library idPDB HeaderMoleculeTitle
c4v19E_PDB header: ribosomeChain: E: PDB Molecule: mitoribosomal protein ul3m, mrpl3;PDBTitle: structure of the large subunit of the mammalian2 mitochondrial ribosome, part 1 of 2


Added to library: Sat Oct 11 08:28:40 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HGKSVTWWDEHLSEENVPFVKQLVSDENKAQLASKLCPLKDEPWPIHPWEPGSSRVGLIALKLGMMPLWT
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Known secondary structure (DSSP)






TTTT

TTTT

TTTS







TT




B
 .........80.........90.........100.........110.........120.........130.........140
Sequence KDGQKHVVTLLQVQDCHVLKYTPKENHNGRMAALTVGGKTVSHFHKSASILEFYQELGLPPKQKVKIFNV
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Known secondary structure (DSSP) TTS


S

STTTTSSS
SB

GGGS
TTTS

BS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TENAVIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMRRWGFKGQPATHGQTKTHRRPGAISTGDVARV
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Known secondary structure (DSSP)
GGG


SS

GGGS
SS






T





SSSS

S
SS




S
TTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence WPGTKMPGQLGNIDRTAFGLKVWRINTKHNIIYVNGSVPGHKNCLVKIKDSKLPAYKDFCKNLPFPTYFP
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Known secondary structure (DSSP)
TT


S
S
STTTTS

SS
TT


STTSTTGGGGS
SS


 .........290.........300.......
Sequence DGDEEALPEDLYDENVCQPGAPSITFT
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Known secondary structure (DSSP)




S
TTB

SSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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