PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4v0pA_

Fold library id	PDB Header	Molecule	Title
c4v0pA_	PDB header: immune system	Chain: A: PDB Molecule: melanoma-associated antigen 3;	PDBTitle: crystal structure of the mage homology domain of human mage-a3

Links to external resources
Added to library: Sat Oct 4 09:50:55 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S M E F Q A A L S R K V A E L V H F L L L K Y R A R E P V T K A E M L G S V V G N W Q Y F F P V I F S K A S S S L Q L V F G I E L M E V D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
G G G G G G
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I G H L Y I F A T C L G L S Y D G L L G D N Q I M P K A G L L I I V L A I I A R E G D C A P E E K I W E E L S V L E V F E G R E D S I L G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T G G G
S
T T
S S
T T
G G G T T
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . .

Sequence P K K L L T Q H F V Q E N Y L E Y R Q V P G S D P A C Y E F L W G P R A L V E T S Y V K V L H H M V K I S G G P H I S Y P P L H E W V L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
S S
T T T S
G G G T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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All images and data generated by Phyre2 are free to use in any publication with acknowledgement
Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	M	E	F	Q	A	A	L	S	R	K	V	A	E	L	V	H	F	L	L	L	K	Y	R	A	R	E	P	V	T	K	A	E	M	L	G	S	V	V	G	N	W	Q	Y	F	F	P	V	I	F	S	K	A	S	S	S	L	Q	L	V	F	G	I	E	L	M	E	V	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T												S		G	G	G	G	G	G																									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	G	H	L	Y	I	F	A	T	C	L	G	L	S	Y	D	G	L	L	G	D	N	Q	I	M	P	K	A	G	L	L	I	I	V	L	A	I	I	A	R	E	G	D	C	A	P	E	E	K	I	W	E	E	L	S	V	L	E	V	F	E	G	R	E	D	S	I	L	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T							G	G	G		S						T	T																					S	S												T	T		G	G	G	T	T		T	T		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Sequence	P	K	K	L	L	T	Q	H	F	V	Q	E	N	Y	L	E	Y	R	Q	V	P	G	S	D	P	A	C	Y	E	F	L	W	G	P	R	A	L	V	E	T	S	Y	V	K	V	L	H	H	M	V	K	I	S	G	G	P	H	I	S	Y	P	P	L	H	E	W	V	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S							T	T		S	S																											T	T	T	S								G	G	G	T	S