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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4v0nH_

Fold library idPDB HeaderMoleculeTitle
c4v0nH_PDB header: hydrolase/structural proteinChain: H: PDB Molecule: bardet-biedl syndrome 1 protein;PDBTitle: crystal structure of bbs1n in complex with arl6dn, soaked with2 mercury


Added to library: Sat Nov 22 08:14:33 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VRSVWLDAFNDPVAGISAYTPCVHTCNLFGDGENRLVIADEDRKLKIWKGTQKASEHPLLDTPVAICSYI
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Known secondary structure (DSSP)




TT





GGG
TTSSSSB
TTSTT
SS


B
 .........80.........90.........100.........110.........120.........130.........140
Sequence SENTAPRLPALAVAAGSHIYIYRNLRPYYKFVLPPENVNTEETTVITCMDVVKQAIDEPDAVSCLVVGTE
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Known secondary structure (DSSP) S

SS



TT
SSS












SSSS
SS
BT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRITVAGRDGKLYHIRNGELSQTIIQLEAQPVGL
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Known secondary structure (DSSP) TT
SSTT

SS
TTTTTSTT
S


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VRLAKHVAVGCMNDVVHAYTPTGHKSWSLYLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLV
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Known secondary structure (DSSP)
SSSTTS
TTS

SS

TTS
TTSTT
 .........290.........300.........310.........320.....
Sequence SVHVSPNPVTALWFGRYGREDNTLLAITKSGALDIKMLPRTANLE
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Known secondary structure (DSSP)
SS
BTTTS


TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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