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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ux8E_

Fold library idPDB HeaderMoleculeTitle
c4ux8E_PDB header: signaling proteinChain: E: PDB Molecule: gdnf family receptor alpha-1;PDBTitle: ret recognition of gdnf-gfralpha1 ligand by a composite binding site2 promotes membrane-proximal self-association


Added to library: Sat Oct 4 09:57:35 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRLDCVKASDQCLKEQSCSTKYRTLRQCVAGKETNFSLTSGLEAKDECRSAMEALKQKSLYNCRCKRGMK
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Known secondary structure (DSSP)



S

TTSS
TTT


SS
TTTSS





TT

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEKNCLRIYWSMYQSKGNNCLDAAKACNLDDTCKKYRSAYITPCTTSMSNEVCNRRKCHKALRQFFDKVP
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Known secondary structure (DSSP) T




TSS
SSTT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKHSYGMLFCSCRDIACTERRRQTIVPVCSYEERERPNCLSLQDSCKTNYICRSRLADFFTNCQPESRSV
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Known secondary structure (DSSP) S


SSTT
T

SS

BST


SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SNCLKENYADCLLAYSGLIGTVMTPNYVDSSSLSVAPWCDCSNSGNDLEDCLKFLNFFKDNTCLKNAIQA
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Known secondary structure (DSSP) S


GGGTTTTSTT

SSSSSS

S
B
TT
GGGT
 ....
Sequence FGNG
Predicted secondary structure


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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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