PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4uw2C_

Fold library id	PDB Header	Molecule	Title
c4uw2C_	PDB header: immune system	Chain: C: PDB Molecule: csm1;	PDBTitle: crystal structure of csm1 in t.onnurineus

Links to external resources
Added to library: Sat Mar 28 08:16:17 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A T F E E L S X A S T G T R R L G V X K G D Y F F K G Y I G A I I E G K F G Y G D V P S L R D W P E E P D I V V V Y A G G D D F F I V G A W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S S
T T
S S
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D Q I F E L A F R V R R A F N A Y F D E R T P I Y R X A D V V S E R L D T A K D E G R N R V F V V G R S R P L D G K H K L S Y E W N H Y E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
B
S
T T T T S
S S
S
T T S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 .

Sequence L W R T Y A P R I Y A G N G R L K G K L E S K K G L L W K L L P N D V R W A L F P E L V G I W V D G V L K I V L X A V R R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
S S S
B
S S
S S
T T
S S
T T T S
G G G T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	F	E	E	L	S	X	A	S	T	G	T	R	R	L	G	V	X	K	G	D	Y	F	F	K	G	Y	I	G	A	I	I	E	G	K	F	G	Y	G	D	V	P	S	L	R	D	W	P	E	E	P	D	I	V	V	V	Y	A	G	G	D	D	F	F	I	V	G	A	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S	S	S	S																					T	T										S	S				S	S										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	Q	I	F	E	L	A	F	R	V	R	R	A	F	N	A	Y	F	D	E	R	T	P	I	Y	R	X	A	D	V	V	S	E	R	L	D	T	A	K	D	E	G	R	N	R	V	F	V	V	G	R	S	R	P	L	D	G	K	H	K	L	S	Y	E	W	N	H	Y	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	T	T			B		S			T	T	T								T							S		S	S					S						T	T	S				S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Sequence	L	W	R	T	Y	A	P	R	I	Y	A	G	N	G	R	L	K	G	K	L	E	S	K	K	G	L	L	W	K	L	L	P	N	D	V	R	W	A	L	F	P	E	L	V	G	I	W	V	D	G	V	L	K	I	V	L	X	A	V	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										B		S	S	S		B		S	S		S	S		T	T									S	S						T	T	T	S				G	G	G	T								S