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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4uuyA_

Fold library idPDB HeaderMoleculeTitle
c4uuyA_PDB header: transport proteinChain: A: PDB Molecule: vacuolar membrane protein pep3;PDBTitle: structural identification of the vps18 beta-propeller reveals2 a critical role in the hops complex stability and function.


Added to library: Sat Nov 1 08:17:30 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SIKTRIEEVQLQFLTGNTELTHLKVSNDQLIVTTQRTIYRINLQDPAIVNHFDCPLSKELETIMNVHVSP
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Known secondary structure (DSSP)



TTTTTT



TT
SSTTSTT




SSS


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence MGSVILIRTNFGRYMLLKDGEFTQLNKIKNLDLSSLHWINETTFLMGIKKTPKLYRVELTGKDITTKLWY
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Known secondary structure (DSSP) TSS
TTS
TT
GGGTT

SSSSTTS

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ENKKLSGGIDGIAYWEGSLLLTIKDNILYWRDVTNMKFPLVLPDESEQFERLKHHAIKKFDSYNGLFAWV
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Known secondary structure (DSSP)
TTS
S
TTTTS

TTS
SSB
S
S

B

S

S
STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TSNGIVFGDLKEFGKFLSSSKVLLNFELPDLIKDIVLTAFHILLLRKNTVTMVSQLNNDVVFHETIEKFL
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Known secondary structure (DSSP) BSSTT



TTTT
GGGS



SSTTTTT




 .........290.........300.........310.......
Sequence GLVRDSVKETFWCFSNINVFEIIIENEPNSVWNLLVR
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Known secondary structure (DSSP) TTTTSS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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