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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4uupB_

Fold library idPDB HeaderMoleculeTitle
c4uupB_PDB header: oxidoreductaseChain: B: PDB Molecule: malate dehydrogenase;PDBTitle: reconstructed ancestral trichomonad malate dehydrogenase in2 complex with nadh, so4, and po4


Added to library: Sat Aug 15 08:30:05 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EPIHVLITGAAGQIGYALAFRIAKGDLFGDRKVVLHLLEIPPAMKALEGVCMELQDCAFPTLAGVVATDD
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Known secondary structure (DSSP)

STTSTTTTTTS


GGGTTT
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PEEAFKDVDVAFLVGSFPRKPGMERADLLEKNAGIFKVQGKALSEYAKPTVKVLVVGNPANTNCLIAMAN
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Known secondary structure (DSSP) STT
S






TT

S
TT

SSST
 .........150.........160.........170.........180.........190.........200.........210
Sequence APKLGPENFSAMTRLDHNRAIGEIAAKLGVPVDKVHNVVVWGNHSNTQVPDVSHATVDKEGGTKKVSDAL
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Known secondary structure (DSSP)
TTS
GGG

T

GGG

B
SSTT

TT

SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PKEYLEGEFVQKIAQRGGAVIEARGASSAASAANAALCHMRDWLFGTKPGDWVSMGIPVPEGNPYGIKPG
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Known secondary structure (DSSP)
TTSS




TT



TT
TT


SS
 .........290.........300.........310.........320.........330.
Sequence VIYSFPCTVDKDGKVHIVEGLEINDWVREKMEATEKELIEERETAFKVLAQ
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Known secondary structure (DSSP) S
TT








T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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