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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4uunA_

Fold library idPDB HeaderMoleculeTitle
c4uunA_PDB header: oxidoreductaseChain: A: PDB Molecule: l-lactate dehydrogenase;PDBTitle: trichomonas vaginalis lactate dehydrogenase in complex with nadh


Added to library: Sat Aug 15 08:27:10 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEAAHVLITGAAGQIGYILSHWIASGELYGDRQVYLHLLDIPPAMNRLTALTMELEDCAFPHLAGFVATT
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Known secondary structure (DSSP)


TTTSTTTTTTTS


GGGTTT
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DPKAAFKDIDCAFLVASMPLKPGQVRADLISSNSVIFKNTGEYLSKWAKPSVKVLVIGNPDNTNCEIAML
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Known secondary structure (DSSP)
TT
S






TT

S
TT

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence HAKNLKPENFSSLSMLDQNRAYYEVASKLGVDVKDVHDIIVWGNHGESMVADLTQATFTKEGKTQKVVDV
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Known secondary structure (DSSP) T
TT

GGG

TS
GGG

B
SGGG

TT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LDHDYVFDTFFKKIGHRAWDILEHRGFTSAASPTKAAIQHMKAWLFGTAPGEVLSMGIPVPEGNPYGIKP
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Known secondary structure (DSSP) S
TTTSS





TT



TT
TT


S
 .........290.........300.........310.........320.........330.....
Sequence GVVFSFPCNVDKEGKIHVVEGFKVNDWLREKLDFTEKDLFHEKEIALNHLAQLEH
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Known secondary structure (DSSP) SS
TTS









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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